ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-192
source: miRBase, original name: ppy-mir-192 (MI0014854)
SEQUENCE & STRUCTURE| miRNA CTGACCTATGAATTGACAGCC miRNA* CTGCCAATTCCATAGGTCACAG mismatches: 2 bulges: 1 |
pre-miRNA
GCCGAGACCGAGTGCACAGGGCTCTGACCTATGAATTGACAGCCAGTGCTCTCGTCTCCCCTCTGGCTGCCAATTCCATAGGTCACAGGTATGTTCGCCT
CAATGCCAGC
dot-bracket secondary structure
.........(((.(((((.(.((.((((((((((((((.(((((((................))))))).))))).))))))))).)).).)))..))))
).........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
GCCGAGACCGAGTGCACAGGGCTCTGACCTATGAATTGACAGCCAGTGCTCTCGTCTCCCCTCTGGCTGCCAATTCCATAGGTCACAGGTATGTTCGCCT
CAATGCCAGC
dot-bracket secondary structure
.........(((.(((((.(.((.((((((((((((((.(((((((................))))))).))))).))))))))).)).).)))..))))
).........
SIMILARITIES| miRBase hsa-mir-192: 6e-58 PMRD no hits microPC no hits | UniProt no hits RFAM mir-192: 7e-49 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
