ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-194
source: miRBase, original name: ppy-mir-194 (MI0003028)
SEQUENCE & STRUCTURE| miRNA TGTAACAGCAACTCCATGTGGA miRNA* CAGTGGAGATGTTGTTACTTT mismatches: 2 bulges: 1 |
pre-miRNA
ATGGTGTTATCAAGTGTAACAGCAACTCCATGTGGACTGTGTACCAATTTCCAGTGGAGATGTTGTTACTTTTGATGGTTACCAA
dot-bracket secondary structure
.(((((..((((((.(((((((((.((((((.((((..((......)).)))))))))).))))))))).))))))..).)))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
ATGGTGTTATCAAGTGTAACAGCAACTCCATGTGGACTGTGTACCAATTTCCAGTGGAGATGTTGTTACTTTTGATGGTTACCAA
dot-bracket secondary structure
.(((((..((((((.(((((((((.((((((.((((..((......)).)))))))))).))))))))).))))))..).)))).
SIMILARITIES| miRBase age-mir-194: 1e-40 PMRD no hits microPC no hits | UniProt no hits RFAM mir-194: 2e-39 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"
