ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-15
source: miRBase, original name: ppy-mir-195 (MI0014857)
SEQUENCE & STRUCTURE| miRNA TAGCAGCACAGAAATATTGGC miRNA* CAATATTGGCTGTGCTGCTCCA mismatches: 2 bulges: 1 |
pre-miRNA
AGCTTCCCTGGCTCTAGCAGCACAGAAATATTGGCACAGGGAAGCGAGTCTGCCAATATTGGCTGTGCTGCTCCAGGCAGGGTGGTG
dot-bracket secondary structure
.(((.(((((.((..((((((((((.((((((((((..............))))))))))..))))))))))..)).))))).))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
AGCTTCCCTGGCTCTAGCAGCACAGAAATATTGGCACAGGGAAGCGAGTCTGCCAATATTGGCTGTGCTGCTCCAGGCAGGGTGGTG
dot-bracket secondary structure
.(((.(((((.((..((((((((((.((((((((((..............))))))))))..))))))))))..)).))))).))).
SIMILARITIES| miRBase hsa-mir-195: 3e-44 PMRD no hits microPC no hits | UniProt no hits RFAM mir-16: 2e-27 |
Identical with: ptr-mir-195 from miRBase (MNEST030270) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
