ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-208
source: miRBase, original name: ppy-mir-208b (MI0014865)
SEQUENCE & STRUCTURE| miRNA ATAAGACGAACAAAAGGTTTGT miRNA* AAGCTTTTTGCTCGAATTATGT mismatches: 4 bulges: 0 |
pre-miRNA
CCTCTCAGGGAAGCTTTTTGCTCGAATTATGTTTCTGATCCGAATATAAGACGAACAAAAGGTTTGTCTGAGGGCAG
dot-bracket secondary structure
.((((((((.((((((((((.(((..((((((((.......))))))))..))).)))))))))).))))))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
CCTCTCAGGGAAGCTTTTTGCTCGAATTATGTTTCTGATCCGAATATAAGACGAACAAAAGGTTTGTCTGAGGGCAG
dot-bracket secondary structure
.((((((((.((((((((((.(((..((((((((.......))))))))..))).)))))))))).))))))))...
SIMILARITIES| miRBase mml-mir-208b: 2e-38 PMRD no hits microPC no hits | UniProt no hits RFAM mir-208: 8e-29 |
Identical with: ptr-mir-208b from miRBase (MNEST030286) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
