ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-383
source: miRBase, original name: ppy-mir-383 (MI0014931)
SEQUENCE & STRUCTURE| miRNA AGATCAGAAGGTGATTGTGGCT miRNA* CCACAGCACTGCCTGGTCAGA mismatches: 3 bulges: 1 |
pre-miRNA
GCTCCTCAGATCAGAAGGTGATTGTGGCTTTGGGTGGATATTAATCAGCCACAGCACTGCCTGGTCAGAAAGAG
dot-bracket secondary structure
)(((.((.((((((..((((.((((((((...(((........)))))))))))))))..)))))).))..)))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
GCTCCTCAGATCAGAAGGTGATTGTGGCTTTGGGTGGATATTAATCAGCCACAGCACTGCCTGGTCAGAAAGAG
dot-bracket secondary structure
)(((.((.((((((..((((.((((((((...(((........)))))))))))))))..)))))).))..)))
SIMILARITIES| miRBase eca-mir-383: 5.0E-36 PMRD no hits microPC no hits | UniProt no hits RFAM 3mir-383: 3.0E-25 |
Identical with: cfa-mir-383 from miRBase (MNEST026834), hsa-mir-383 from miRBase , mml-mir-383 from miRBase , ptr-mir-383 from miRBase , eca-mir-383 from miRBase |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
