ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-423
source: miRBase, original name: ppy-mir-423 (MI0014939)
SEQUENCE & STRUCTURE| miRNA TGAGGGGCAGAGAGCGAGACTTT miRNA* AGCTCGGTCTGAGGCCCCTCAGT mismatches: 3 bulges: 2 |
pre-miRNA
AGGAAGTTAGGCTGAGGGGCAGAGAGCGAGACTTTTCTATTTTCCAAAAGCTCGGTCTGAGGCCCCTCAGTCTTGCTTCCTACCCCGCGC
dot-bracket secondary structure
(((((((.((((((((((((..(((.((((.(((((.........))))))))).)))...)))))))))))).))))))).........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
AGGAAGTTAGGCTGAGGGGCAGAGAGCGAGACTTTTCTATTTTCCAAAAGCTCGGTCTGAGGCCCCTCAGTCTTGCTTCCTACCCCGCGC
dot-bracket secondary structure
(((((((.((((((((((((..(((.((((.(((((.........))))))))).)))...)))))))))))).))))))).........
SIMILARITIES| miRBase mml-mir-423: 4e-46 PMRD no hits microPC no hits | UniProt no hits RFAM mir-423: 2e-39 |
Identical with: rno-mir-423 from miRBase (MNEST032908) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
