ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-450
source: miRBase, original name: ppy-mir-450a-2 (MI0014950)
SEQUENCE & STRUCTURE| miRNA TTTTGCGATGTGTTCCTAATA miRNA* TTGGGGACATTTTGCATTCAT mismatches: 4 bulges: 0 |
pre-miRNA
CCAAAGAAAGATGCTAAACTATTTTTGCGATGTGTTCCTAATACGTAATATAAATGTATTGGGGACATTTTGCATTCATAGTTTTGTATCAATGATATGG
dot-bracket secondary structure
.........(((((.(((((((...(((((.(((((((((((((((.......))))))))))))))).)))))...))))))).)))))..........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
CCAAAGAAAGATGCTAAACTATTTTTGCGATGTGTTCCTAATACGTAATATAAATGTATTGGGGACATTTTGCATTCATAGTTTTGTATCAATGATATGG
dot-bracket secondary structure
.........(((((.(((((((...(((((.(((((((((((((((.......))))))))))))))).)))))...))))))).)))))..........
SIMILARITIES| miRBase mml-mir-450a-2: 3e-47 PMRD no hits microPC no hits | UniProt no hits RFAM mir-450: 1e-31 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
