ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-455
source: miRBase, original name: ppy-mir-455 (MI0014955)
SEQUENCE & STRUCTURE| miRNA GCAGTCCATGGGCATATACAC miRNA* GTATGTGCCTTTGGACTACAT mismatches: 4 bulges: 0 |
pre-miRNA
CTCCCTGGCGTGAGGGTATGTGCCTTTGGACTACATCGTGGAAGCCAGCACCATGCAGTCCATGGGCATATACACTTGCCTCAAGGCCTATGTCATC
dot-bracket secondary structure
).....(((.(((((((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).....)))))..))).........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
CTCCCTGGCGTGAGGGTATGTGCCTTTGGACTACATCGTGGAAGCCAGCACCATGCAGTCCATGGGCATATACACTTGCCTCAAGGCCTATGTCATC
dot-bracket secondary structure
).....(((.(((((((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).....)))))..))).........
SIMILARITIES| miRBase mml-mir-455: 1.0E-49 PMRD no hits microPC no hits | UniProt no hits RFAM 5mir-455: 1.0E-37 |
Identical with: hsa-mir-455 from miRBase (MNEST028666), ssc-mir-455 from miRBase , mml-mir-455 from miRBase , cfa-mir-455 from miRBase , bta-mir-455 from miRBase , ptr-mir-455 from miRBase |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
