ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-154
source: miRBase, original name: ppy-mir-487a (MI0014959)
SEQUENCE & STRUCTURE| miRNA AATCATACAGGGACATCCAGTT miRNA* GTGGTTATCCCTGCTGTGTTCG mismatches: 4 bulges: 2 |
pre-miRNA
GGTACTTGAAGAGTGGTTATCCCTGCTGTGTTCGCTTAATTTATGACGAATCATACAGGGACATCCAGTTTTTCAGTATC
dot-bracket secondary structure
((((((.(((((.(((...((((((.((((((((.(((.....))))))).))))))))))...))).))))).))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
GGTACTTGAAGAGTGGTTATCCCTGCTGTGTTCGCTTAATTTATGACGAATCATACAGGGACATCCAGTTTTTCAGTATC
dot-bracket secondary structure
((((((.(((((.(((...((((((.((((((((.(((.....))))))).))))))))))...))).))))).))))))
SIMILARITIES| miRBase hsa-mir-487a: 4e-40 PMRD no hits microPC no hits | UniProt no hits RFAM mir-154: 2e-36 |
Identical with: hsa-mir-487a from miRBase (MNEST028675) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
