ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-650
source: miRBase, original name: ppy-mir-650 (MI0015125)
SEQUENCE & STRUCTURE| miRNA AGGAGGCAGCTCTCTCGGGAC miRNA* CCTGGTCTCTGCTCCTCCTCA mismatches: 5 bulges: 2 |
pre-miRNA
CAGTGCTGGGGTCTCAGGAGGCAGCTCTCTCGGGACGTCTCCACCATGGCCTGGTCTCTGCTCCTCCTCACCCTCCTCACTCAGGGCACAGGTGA
dot-bracket secondary structure
..((((((((((...((((((.(((....(((((.(((.......))).))))).....))))))))).)))))..........)))))......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
CAGTGCTGGGGTCTCAGGAGGCAGCTCTCTCGGGACGTCTCCACCATGGCCTGGTCTCTGCTCCTCCTCACCCTCCTCACTCAGGGCACAGGTGA
dot-bracket secondary structure
..((((((((((...((((((.(((....(((((.(((.......))).))))).....))))))))).)))))..........)))))......
SIMILARITIES| miRBase hsa-mir-650: 2e-39 PMRD no hits microPC no hits | UniProt no hits RFAM mir-650: 3e-29 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
