ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-675
source: miRBase, original name: ppy-mir-675b (MI0015139)
SEQUENCE & STRUCTURE| miRNA CTGTATGCCCTCACCGCTCA miRNA* GTGCGGAGAGGGCCCACAGTG mismatches: 3 bulges: 1 |
pre-miRNA
CGAGGCACTGCGGCCCAGGGTCTGGTGCGGAGAGGGCCCACAGTGGACTTGGTGACGCTGTATGCCCTCACCGCTCAGCCCCTGGGGCTGGCTTG
dot-bracket secondary structure
((((.((....(.(((((((.((((.((((.((((((..((((((..........))))))..)))))).)))))))).))))))).))).))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
CGAGGCACTGCGGCCCAGGGTCTGGTGCGGAGAGGGCCCACAGTGGACTTGGTGACGCTGTATGCCCTCACCGCTCAGCCCCTGGGGCTGGCTTG
dot-bracket secondary structure
((((.((....(.(((((((.((((.((((.((((((..((((((..........))))))..)))))).)))))))).))))))).))).))))
SIMILARITIES| miRBase hsa-mir-675: 7e-36 PMRD no hits microPC no hits | UniProt no hits RFAM mir-675: 1e-22 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
