ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-708
source: miRBase, original name: ppy-mir-708 (MI0015140)
SEQUENCE & STRUCTURE| miRNA AAGGAGCTTACAATCTAGCTGGG miRNA* CAACTAGACTGTGAGCTTCTAGA mismatches: 5 bulges: 0 |
pre-miRNA
AACTGCCCTCAAGGAGCTTACAATCTAGCTGGGGGTAAATGACTTGCACATGAACACAACTAGACTGTGAGCTTCTAGAGGGCAGGGA
dot-bracket secondary structure
..((((((((.(((((((((((.(((((.((...((..(((.......)))..)).)).))))).))))))))))).))))))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
AACTGCCCTCAAGGAGCTTACAATCTAGCTGGGGGTAAATGACTTGCACATGAACACAACTAGACTGTGAGCTTCTAGAGGGCAGGGA
dot-bracket secondary structure
..((((((((.(((((((((((.(((((.((...((..(((.......)))..)).)).))))).))))))))))).))))))))...
SIMILARITIES| miRBase mml-mir-708: 7e-45 PMRD no hits microPC no hits | UniProt no hits RFAM mir-708: 3e-38 |
Identical with: hsa-mir-708 from miRBase (MNEST028992) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
