ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-770
source: miRBase, original name: ppy-mir-770 (MI0015148)
SEQUENCE & STRUCTURE| miRNA TCCAGTACCACGTGTCAGGGCCA miRNA* GCCTGATGTGGTGCTGGGGC mismatches: 2 bulges: 3 |
pre-miRNA
AGGAGCCACCTTCCGAGCCTCCAGTACCACGTGTCAGGGCCACATGAGCTGGGCCTCGTGGGCCTGATGTGGTGCTGGGGCCTCAGGGGTCTGCTCTT
dot-bracket secondary structure
((((((.(((((..(((.((((((((((((((....(((((.((((((......))))))))))).)))))))))))))).))).)))))..))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
AGGAGCCACCTTCCGAGCCTCCAGTACCACGTGTCAGGGCCACATGAGCTGGGCCTCGTGGGCCTGATGTGGTGCTGGGGCCTCAGGGGTCTGCTCTT
dot-bracket secondary structure
((((((.(((((..(((.((((((((((((((....(((((.((((((......))))))))))).)))))))))))))).))).)))))..))))))
SIMILARITIES| miRBase mml-mir-770: 8e-51 PMRD no hits microPC no hits | UniProt no hits RFAM mir-770: 6e-49 |
Identical with: ptr-mir-770 from miRBase (MNEST030602) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
