ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-874
source: miRBase, original name: ppy-mir-874 (MI0015151)
SEQUENCE & STRUCTURE| miRNA CTGCCCTGGCCCGAGGGACCGA miRNA* GGCCCCACGCACCAGGGTAAGA mismatches: 6 bulges: 0 |
pre-miRNA
TTAGCCCTGCGGCCCCACGCACCAGGGTAAGAGAGACTCTCGCTTCCTGCCCTGGCCCGAGGGACCGACTGGCTGGGC
dot-bracket secondary structure
((((((...(((.(((.((..((((((((.(((.(.....)..))).))))))))..)).))).)))...))))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
TTAGCCCTGCGGCCCCACGCACCAGGGTAAGAGAGACTCTCGCTTCCTGCCCTGGCCCGAGGGACCGACTGGCTGGGC
dot-bracket secondary structure
((((((...(((.(((.((..((((((((.(((.(.....)..))).))))))))..)).))).)))...))))))..
SIMILARITIES| miRBase cfa-mir-874: 5e-39 PMRD no hits microPC no hits | UniProt no hits RFAM mir-874: 1e-37 |
Identical with: eca-mir-874 from miRBase (MNEST027275) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
