ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-877
source: miRBase, original name: ppy-mir-877 (MI0015154)
SEQUENCE & STRUCTURE| miRNA GTAGAGGAGATGGCGCAGGG miRNA* CTTCTCCCTCCTCCCAG mismatches: 5 bulges: 2 |
pre-miRNA
GTAGAGGAGATGGCGCAGGGGACACGGGCAAAGACTCGGGGGTTCCTGGGACCCTCAGACATGTGTCCTCTTCTCCCTCCTCCCAG
dot-bracket secondary structure
...((((((..((.(.((((((((((........((.(((((((.....)))))))))...)))))))))).).))))))))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
GTAGAGGAGATGGCGCAGGGGACACGGGCAAAGACTCGGGGGTTCCTGGGACCCTCAGACATGTGTCCTCTTCTCCCTCCTCCCAG
dot-bracket secondary structure
...((((((..((.(.((((((((((........((.(((((((.....)))))))))...)))))))))).).))))))))....
SIMILARITIES| miRBase mml-mir-877: 2e-41 PMRD no hits microPC no hits | UniProt no hits RFAM mir-877: 3e-35 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
