ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-885
source: miRBase, original name: ppy-mir-885 (MI0015155)
SEQUENCE & STRUCTURE| miRNA TCCATTACACTACCCTGCCTCT miRNA* AGGCAGCGGGGTGTAGTGGATA mismatches: 0 bulges: 2 |
pre-miRNA
CCGCACTCTCTCCATTACACTACCCTGCCTCTTCTCCATGAGAGGCAGCGGGGTGTAGTGGATAGAGCACGGGT
dot-bracket secondary structure
(((..((((.(((((((((((.(((((((((((......))))))))).))))))))))))).))))..)))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
CCGCACTCTCTCCATTACACTACCCTGCCTCTTCTCCATGAGAGGCAGCGGGGTGTAGTGGATAGAGCACGGGT
dot-bracket secondary structure
(((..((((.(((((((((((.(((((((((((......))))))))).))))))))))))).))))..)))..
SIMILARITIES| miRBase mml-mir-885: 1e-36 PMRD no hits microPC no hits | UniProt no hits RFAM mir-885: 5e-33 |
Identical with: ptr-mir-885 from miRBase (MNEST030608) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
