ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-887
source: miRBase, original name: ppy-mir-887 (MI0015157)
SEQUENCE & STRUCTURE| miRNA GTGAACGGGCGCCATCCCGAGG miRNA* TTGGGAGCCCTGTTAGACTC mismatches: 1 bulges: 4 |
pre-miRNA
GTGCAGATCCTTGGGAGCCCTGTTAGACTCTGGATTTTACACTTGGAGTGAACGGGCGCCATCCCGAGGCTTTGCACAG
dot-bracket secondary structure
(((((((.((((((((((((((((..((((..(.........)..)))).)))))).))..)))))))).)))))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
GTGCAGATCCTTGGGAGCCCTGTTAGACTCTGGATTTTACACTTGGAGTGAACGGGCGCCATCCCGAGGCTTTGCACAG
dot-bracket secondary structure
(((((((.((((((((((((((((..((((..(.........)..)))).)))))).))..)))))))).)))))))..
SIMILARITIES| miRBase hsa-mir-887: 1e-39 PMRD no hits microPC no hits | UniProt no hits RFAM mir-887: 1e-37 |
Identical with: hsa-mir-887 from miRBase (MNEST029020) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
