ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-942
source: miRBase, original name: ppy-mir-942 (MI0015175)
SEQUENCE & STRUCTURE| miRNA CCTTCTCTGTTTTGGCCATGGG miRNA* CATGGCCGAAACAGAGAAGTTA mismatches: 2 bulges: 0 |
pre-miRNA
ATTAGGAGAGTACCTTCTCTGTTTTGGCCATGGGTGTACTCACAGCCCCTCACACATGGCCGAAACAGAGAAGTTACTTTCCTAAT
dot-bracket secondary structure
((((((((((((.(((((((((((((((((((.(((..............))).))))))))))))))))))).))))))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
ATTAGGAGAGTACCTTCTCTGTTTTGGCCATGGGTGTACTCACAGCCCCTCACACATGGCCGAAACAGAGAAGTTACTTTCCTAAT
dot-bracket secondary structure
((((((((((((.(((((((((((((((((((.(((..............))).))))))))))))))))))).))))))))))))
SIMILARITIES| miRBase hsa-mir-942: 6e-39 PMRD no hits microPC no hits | UniProt no hits RFAM mir-942: 6e-33 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
