ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-1179
source: miRBase, original name: ppy-mir-1179 (MI0015179)
SEQUENCE & STRUCTURE| miRNA AAGCATTCTTTCATTGGCTGG miRNA* AACCAATAAGAGGATGCCATTTA mismatches: 3 bulges: 2 |
pre-miRNA
GGCTGGAAAGGAAGAAGCATTCTTTCATTGGCTGGTGTGTATTGCCTTGTCAACCAATAAGAGGATGCCATTTATCCTTTTCTGACTAGCT
dot-bracket secondary structure
((((((((((((.((((((((((((.(((((.((..(..........)..)).))))).)))))))))..))).)))))).....))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
GGCTGGAAAGGAAGAAGCATTCTTTCATTGGCTGGTGTGTATTGCCTTGTCAACCAATAAGAGGATGCCATTTATCCTTTTCTGACTAGCT
dot-bracket secondary structure
((((((((((((.((((((((((((.(((((.((..(..........)..)).))))).)))))))))..))).)))))).....))))))
SIMILARITIES| miRBase hsa-mir-1179: 3e-44 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
