ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-1183
source: miRBase, original name: ppy-mir-1183 (MI0015182)
SEQUENCE & STRUCTURE| miRNA CACTGTAGGTGATGGTGAGAGTGGGCA miRNA* ACACAGAACATTAGAGAAGATAGGAGT mismatches: 12 bulges: 2 |
pre-miRNA
ATTATTCAAATGCTCGGAGACACAGAACATTAGAGAAGATAGGAGTTCACTGTAGGTGATGGTGAGAGTGGGCATGGAGCAGGAATGCC
dot-bracket secondary structure
..(((((...(((((.(.(.(((....(((((..(...((((.......))))...)..)))))...)))..).).))))).)))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
ATTATTCAAATGCTCGGAGACACAGAACATTAGAGAAGATAGGAGTTCACTGTAGGTGATGGTGAGAGTGGGCATGGAGCAGGAATGCC
dot-bracket secondary structure
..(((((...(((((.(.(.(((....(((((..(...((((.......))))...)..)))))...)))..).).))))).)))))..
SIMILARITIES| miRBase hsa-mir-1183: 1e-40 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1183: 4e-37 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
