ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-1200
source: miRBase, original name: ppy-mir-1200 (MI0015186)
SEQUENCE & STRUCTURE| miRNA CTCCTGAGCCATTCTGAGCCTC miRNA* GGTTCAGGAATTTGTCAGGGAT mismatches: 6 bulges: 2 |
pre-miRNA
TGCTACTTCTCCTGAGCCATTCTGAGCCTCAATCACTTGCCAGAGAGATTGGTTCAGGAATTTGTCAGGGATAGCC
dot-bracket secondary structure
.((((..((.(((((....(((((((((..((((.(((....))).))))))))))))).....))))))))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
TGCTACTTCTCCTGAGCCATTCTGAGCCTCAATCACTTGCCAGAGAGATTGGTTCAGGAATTTGTCAGGGATAGCC
dot-bracket secondary structure
.((((..((.(((((....(((((((((..((((.(((....))).))))))))))))).....))))))))))).
SIMILARITIES| miRBase hsa-mir-1200: 8e-38 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: hsa-mir-1200 from miRBase (MNEST029060) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
