ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-1207
source: miRBase, original name: ppy-mir-1207 (MI0015191)
SEQUENCE & STRUCTURE| miRNA TCAGCTGGCCCTCATTTC miRNA* CAGGGAGGGGCTGGCTGGGC mismatches: 5 bulges: 2 |
pre-miRNA
GCAGGGCTGGCAGGGAGGCAGGGAGGGGCTGGCTGGGCCTGGTAGTGGGCATCAGCTGGCCCTCATTTCTTAAGACAGCACTCCTGT
dot-bracket secondary structure
(((((((((.....((((....(((((.(..(((((((((......)))).)))))..))))))...))))....))))...)))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
GCAGGGCTGGCAGGGAGGCAGGGAGGGGCTGGCTGGGCCTGGTAGTGGGCATCAGCTGGCCCTCATTTCTTAAGACAGCACTCCTGT
dot-bracket secondary structure
(((((((((.....((((....(((((.(..(((((((((......)))).)))))..))))))...))))....))))...)))))
SIMILARITIES| miRBase ppy-mir-1207: 3e-44 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1207: 6e-24 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
