ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-1225
source: miRBase, original name: ppy-mir-1225 (MI0015194)
SEQUENCE & STRUCTURE| miRNA GTGGGTACGGCCCAGTGGGGGG miRNA* mismatches: 7 bulges: 86 |
pre-miRNA
GTGGGTACGGCCCAGTGGGGGGGAGAGGGACACGCCCTGGGCTCTGCCCAGGGTGCAGCCGGACTGACTGAGCCCCTGTGCCGCCCCCAG
dot-bracket secondary structure
.((((.....)))).(((((((((.((((...((((((((((...))))))))))..(((((.....))).)))))).).)).)))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
GTGGGTACGGCCCAGTGGGGGGGAGAGGGACACGCCCTGGGCTCTGCCCAGGGTGCAGCCGGACTGACTGAGCCCCTGTGCCGCCCCCAG
dot-bracket secondary structure
.((((.....)))).(((((((((.((((...((((((((((...))))))))))..(((((.....))).)))))).).)).)))))).
SIMILARITIES| miRBase mml-mir-1225: 1e-33 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1225: 3e-32 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
