ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-1226
source: miRBase, original name: ppy-mir-1226 (MI0015195)
SEQUENCE & STRUCTURE| miRNA TCACCAGCCCTGTGTTCCCTAG miRNA* AGGGCATGCAGGCCTGGATGGGG mismatches: 4 bulges: 1 |
pre-miRNA
GTGAGGGCATGCAGGCCTGGATGGGGCAGCTGGGATGGTCCAAAAGGGTGGCCTCACCAGCCCTGTGTTCCCTAG
dot-bracket secondary structure
...((((.(((((((.((((.((((((.(((.((.....)).....))).)))))))))).))))))).))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
GTGAGGGCATGCAGGCCTGGATGGGGCAGCTGGGATGGTCCAAAAGGGTGGCCTCACCAGCCCTGTGTTCCCTAG
dot-bracket secondary structure
...((((.(((((((.((((.((((((.(((.((.....)).....))).)))))))))).))))))).))))..
SIMILARITIES| miRBase mml-mir-1226: 3e-37 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1226: 6e-36 |
Identical with: hsa-mir-1226 from miRBase (MNEST029073) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
