ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-1236
source: miRBase, original name: ppy-mir-1236 (MI0015199)
SEQUENCE & STRUCTURE| miRNA CCTCTTCCCCTTGTCTCTCCAG miRNA* GTGAGTGACAGGGGAAATGGGGAT mismatches: 3 bulges: 4 |
pre-miRNA
GTGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCGTCATGGCTTGGCCAACATAATGCCTCTTCCCCTTGTCTCTCC
AG
dot-bracket secondary structure
(.(((.((((((((((..((((...(((..((((.(..((((.....)))).)))))))).((((...))))........)))))))))).)))).))))
..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
GTGAGTGACAGGGGAAATGGGGATGGACTGGAAGTGGGCAGCATGGAGCTGACCTTCGTCATGGCTTGGCCAACATAATGCCTCTTCCCCTTGTCTCTCC
AG
dot-bracket secondary structure
(.(((.((((((((((..((((...(((..((((.(..((((.....)))).)))))))).((((...))))........)))))))))).)))).))))
..
SIMILARITIES| miRBase hsa-mir-1236: 9e-51 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
