ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-1244
source: miRBase, original name: ppy-mir-1244 (MI0015202)
SEQUENCE & STRUCTURE| miRNA AAGTAGTTGGTTTGTATGAGATGGTT miRNA* mismatches: 8 bulges: 11 |
pre-miRNA
ATCTTATTCCGAGCATTCCAGTAACTTTTTTGTGTATGTACTTAGCTGTACTATAAGTAGTTGGTTTGTATGAGATGGTTAAAAA
dot-bracket secondary structure
(((((((.....(((..((((..(((......((((.((((......)))))))))))..))))..)))))))))).........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
ATCTTATTCCGAGCATTCCAGTAACTTTTTTGTGTATGTACTTAGCTGTACTATAAGTAGTTGGTTTGTATGAGATGGTTAAAAA
dot-bracket secondary structure
(((((((.....(((..((((..(((......((((.((((......)))))))))))..))))..)))))))))).........
SIMILARITIES| miRBase hsa-mir-1244-1: 4e-43 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: ptr-mir-1244-11 from miRBase (MNEST030659) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
