ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-1246
source: miRBase, original name: ppy-mir-1246 (MI0015204)
SEQUENCE & STRUCTURE| miRNA AATGGGTTTTTGGAGCAGG miRNA* TGACCCAAAGGAAATCAATCCATAGG mismatches: 3 bulges: 7 |
pre-miRNA
TGTATACTTGAATGGGTTTTTGGAGCAGGAGTGGACACCTGACCCAAAGGAAATCAATCCATAGGCTAGCAAT
dot-bracket secondary structure
(((...(((..((((((((((((..((((.(....).))))..))))).......))))))))))...)))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
TGTATACTTGAATGGGTTTTTGGAGCAGGAGTGGACACCTGACCCAAAGGAAATCAATCCATAGGCTAGCAAT
dot-bracket secondary structure
(((...(((..((((((((((((..((((.(....).))))..))))).......))))))))))...)))..
SIMILARITIES| miRBase hsa-mir-1246: 3e-31 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
