ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-1248
source: miRBase, original name: ppy-mir-1248 (MI0015206)
SEQUENCE & STRUCTURE| miRNA ACCTTCTTGTATAAGCACTGTGCTAAA miRNA* TAGCAGAGTACACACAAGAAGAAAA mismatches: 8 bulges: 2 |
pre-miRNA
TTTACCTTCTTGTATAAGCACTGTGCTAAAATTGCAGACACTAGGACCATGTCTTGGTTTTTGCAATAATGCTAGCAGAGTACACACAAGAAGAAAAGTA
ACAGCA
dot-bracket secondary structure
.....((((((((....(.(((.(((((..((((((((.((((((((...)))))))).)))))))).....))))).))).)..)))))))).......
......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
TTTACCTTCTTGTATAAGCACTGTGCTAAAATTGCAGACACTAGGACCATGTCTTGGTTTTTGCAATAATGCTAGCAGAGTACACACAAGAAGAAAAGTA
ACAGCA
dot-bracket secondary structure
.....((((((((....(.(((.(((((..((((((((.((((((((...)))))))).)))))))).....))))).))).)..)))))))).......
......
SIMILARITIES| miRBase hsa-mir-1248: 2e-55 PMRD no hits microPC no hits | UniProt no hits RFAM SNORA81: 6e-43 |
Identical with: ptr-mir-1248 from miRBase (MNEST030671) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
