ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-1250
source: miRBase, original name: ppy-mir-1250 (MI0015208)
SEQUENCE & STRUCTURE| miRNA ACGGTGCTGGATGTGGCCTTT miRNA* AGGCCACATTTTCCAGCCCATTCA mismatches: 1 bulges: 5 |
pre-miRNA
CTGTCCCGCTGGCCTGGCAGGTGACGGTGCTGGATGTGGCCTTTTTGCCTTTTCCAAAGGCCACATTTTCCAGCCCATTCACCCTTCCAGAGCCCTCTGA
GGTGGCCCAGGC
dot-bracket secondary structure
(((..((((((((((((..(((((.((.((((((((((((((((...........))))))))))...))))))))..)))))...)))).)))......
)))))..)))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
CTGTCCCGCTGGCCTGGCAGGTGACGGTGCTGGATGTGGCCTTTTTGCCTTTTCCAAAGGCCACATTTTCCAGCCCATTCACCCTTCCAGAGCCCTCTGA
GGTGGCCCAGGC
dot-bracket secondary structure
(((..((((((((((((..(((((.((.((((((((((((((((...........))))))))))...))))))))..)))))...)))).)))......
)))))..)))..
SIMILARITIES| miRBase hsa-mir-1250: 6e-49 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
