ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-1251
source: miRBase, original name: ppy-mir-1251 (MI0015209)
SEQUENCE & STRUCTURE| miRNA ACTCTAGCTGCCAAAGGCGCT miRNA* CGCTTTGCTCAGCCAGTGTAG mismatches: 5 bulges: 0 |
pre-miRNA
GTGGACTCTAGCTGCCAAAGGCGCTTCTCCTTCTGAACAGAGCGCTTTGCTCAGCCAGTGTAGACATGGC
dot-bracket secondary structure
((..((.((.((((...(((((((((.((.....))...)))))))))...)))).)).))..)).....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
GTGGACTCTAGCTGCCAAAGGCGCTTCTCCTTCTGAACAGAGCGCTTTGCTCAGCCAGTGTAGACATGGC
dot-bracket secondary structure
((..((.((.((((...(((((((((.((.....))...)))))))))...)))).)).))..)).....
SIMILARITIES| miRBase hsa-mir-1251: 3e-34 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1251: 3e-28 |
Identical with: mmu-mir-1251 from miRBase (MNEST032399) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
