ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-1253
source: miRBase, original name: ppy-mir-1253 (MI0015211)
SEQUENCE & STRUCTURE| miRNA AGAGGAGAAGATCAGCCTGCA miRNA* CAGGCTGATCTTCTCCTCTTT mismatches: 0 bulges: 0 |
pre-miRNA
AGCAGCAAGAGGTAAAATCCAAAAGAGGAGAAGATCAGCCTGCAGATGTGGACTGCTAAATGCAGGCTGATCTTCTCCTCTTTGGGATTCTCTTATGAGA
GGCCA
dot-bracket secondary structure
..........(((...((((.(((((((((((((((((((((((....(((....)))..))))))))))))))))))))))).))))((((....))))
.))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
AGCAGCAAGAGGTAAAATCCAAAAGAGGAGAAGATCAGCCTGCAGATGTGGACTGCTAAATGCAGGCTGATCTTCTCCTCTTTGGGATTCTCTTATGAGA
GGCCA
dot-bracket secondary structure
..........(((...((((.(((((((((((((((((((((((....(((....)))..))))))))))))))))))))))).))))((((....))))
.))).
SIMILARITIES| miRBase hsa-mir-1253: 5e-43 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1253: 6e-49 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
