ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-1256
source: miRBase, original name: ppy-mir-1256 (MI0015216)
SEQUENCE & STRUCTURE| miRNA AGGCATTGACTTCTCACTAGCT miRNA* CTAGAGAGAAGTCAATGTATGA mismatches: 2 bulges: 0 |
pre-miRNA
AGTCAGCCTGTTGAAGCTTTGAAGCTTTGATGCCAGGCATTGACTTCTCACTAGCTATGAAAGTCCTAGCTAGAGAGAAGTCAATGTATGACATCTTGTT
TCAATAGATGGCTGTTTCA
dot-bracket secondary structure
(((((..((((((((((...........((((.((.(((((((((((((.(((((((.(.....).))))))).))))))))))))).)).))))..)))
))))))).)))))......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
AGTCAGCCTGTTGAAGCTTTGAAGCTTTGATGCCAGGCATTGACTTCTCACTAGCTATGAAAGTCCTAGCTAGAGAGAAGTCAATGTATGACATCTTGTT
TCAATAGATGGCTGTTTCA
dot-bracket secondary structure
(((((..((((((((((...........((((.((.(((((((((((((.(((((((.(.....).))))))).))))))))))))).)).))))..)))
))))))).)))))......
SIMILARITIES| miRBase ptr-mir-1256: 7e-58 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
