ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: mir-1257
source: miRBase, original name: ppy-mir-1257 (MI0015217)
SEQUENCE & STRUCTURE| miRNA AGTGAATGATGGGTTCTGACC miRNA* TCACTGGCCCCATCCTTCACCCC mismatches: 6 bulges: 2 |
pre-miRNA
GCCCTGGGCTTGTGCTCAGGGAGTGAATGATGGGTTCTGACCCCCATGCACCCCTGGCATCACTGGCCCCATCCTTCACCCCCTGCCAACCACACTTGCC
CTGTGCCT
dot-bracket secondary structure
((.(.((((.((((..(((((.(((((.((((((..((((...(((........)))..)))..)..)))))).))))).))))).....))))...)))
).).))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
GCCCTGGGCTTGTGCTCAGGGAGTGAATGATGGGTTCTGACCCCCATGCACCCCTGGCATCACTGGCCCCATCCTTCACCCCCTGCCAACCACACTTGCC
CTGTGCCT
dot-bracket secondary structure
((.(.((((.((((..(((((.(((((.((((((..((((...(((........)))..)))..)..)))))).))))).))))).....))))...)))
).).))..
SIMILARITIES| miRBase hsa-mir-1257: 7e-30 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
