ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: miR-1302d
source: miRBase, original name: ppy-mir-1302-2 (MI0015257)
SEQUENCE & STRUCTURE| miRNA TTGGGACATACTTATGCTAAA miRNA* TAGCCTAAATATGTCCCAAGC mismatches: 3 bulges: 0 |
pre-miRNA
GGATGCCCAGTTAGTTTGAATTTTAGATAAACAACGAATAATTTCTTAGCCTAAATATGTCCCAAGCTTAGTTTGGGACATACTTATGCTAAAAAACATT
ATTGGTTGTTTATCTGAGATTCAAAATTAAGCATTTT
dot-bracket secondary structure
((((((....(((((((((((((((((((((((((.((((((((.(((((.(((.((((((((((((...)))))))))))).))).))))).))..)))
))).)))))))))))))))))).))))))))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
GGATGCCCAGTTAGTTTGAATTTTAGATAAACAACGAATAATTTCTTAGCCTAAATATGTCCCAAGCTTAGTTTGGGACATACTTATGCTAAAAAACATT
ATTGGTTGTTTATCTGAGATTCAAAATTAAGCATTTT
dot-bracket secondary structure
((((((....(((((((((((((((((((((((((.((((((((.(((((.(((.((((((((((((...)))))))))))).))).))))).))..)))
))).)))))))))))))))))).))))))))))))).
SIMILARITIES| miRBase ppy-mir-1302-1: 6e-74 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1302: 0.0001 |
Identical with: ppy-mir-1302-1 from miRBase (MNEST031356) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
