ABOUT THIS RECORDspecies: Pongo pygmaeus
miRNA family: miR-1302d
source: miRBase, original name: ppy-mir-1302-5 (MI0015260)
SEQUENCE & STRUCTURE| miRNA TTGGGACATACTTATGCTAAA miRNA* AGCATTAGTGTATCACATGC mismatches: 6 bulges: 0 |
pre-miRNA
CCCATTTAAACTTGAATTTCATATAAACAGAGTAATTTTCAGCATTAGTGTATCACATGCAGTATTTGGGACATACTTATGCTAAAAAATTAGGTGGTGT
TGATCTGAAATTCCAGTGTAGATGGGCA
dot-bracket secondary structure
((((((((.(((.((((((((.((.(((((..(((((((.(((((.(((((.((.((.........)).)).))))).)))))..)))))))..)..)))
).)).)))))))).))).))))))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
CCCATTTAAACTTGAATTTCATATAAACAGAGTAATTTTCAGCATTAGTGTATCACATGCAGTATTTGGGACATACTTATGCTAAAAAATTAGGTGGTGT
TGATCTGAAATTCCAGTGTAGATGGGCA
dot-bracket secondary structure
((((((((.(((.((((((((.((.(((((..(((((((.(((((.(((((.((.((.........)).)).))))).)))))..)))))))..)..)))
).)).)))))))).))).))))))))..
SIMILARITIES| miRBase hsa-mir-1302-8: 8e-64 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1302: 0.0000001 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Brameier M, BMC Res Notes. 3:64(2010)., "Genome-wide comparative analysis of microRNAs in three non-human primates"
