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ABOUT THIS RECORD

ID: MNEST031479
species: Ornithorhynchus anatinus
miRNA family: mir-124
source: miRBase, original name: oan-mir-124 (MI0006854)







SEQUENCE & STRUCTURE
miRNA
TAAGGCACGCGGTGAATGCCA

miRNA*
GTGTTCACAGCGGACCTTGAT

mismatches: 5
bulges: 0

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pre-miRNA
CACTAGGCCTGTCTCTCCGTGTTCACAGCGGACCTTGATTTAAATTTGTACACAATTAAGGCACGCGGTGAATGCCAAGAGCCCAGCCAAAG

dot-bracket secondary structure
.....(((..(.((((..((((((((.(((..((((((((.............))))))))..))).))))))))..)))).)..)))....


SIMILARITIES
miRBase mdo-mir-124a-1: 9e-26

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-124: 2e-20

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa

references

[1] Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ, Genome Res. 18:995-1004(2008)., "Conservation of small RNA pathways in platypus"




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