ABOUT THIS RECORDspecies: Ornithorhynchus anatinus
miRNA family: mir-365
source: miRBase, original name: oan-mir-365 (MI0006677)
SEQUENCE & STRUCTURE| miRNA TAATGCCCCTAAAAATCCTTAT miRNA* GAGGGACTTTTGGGGGCAGATGT mismatches: 4 bulges: 1 |
pre-miRNA
GCAGGGAAAATGAGGGACTTTTGGGGGCAGATGTGTTTCCATTGCACTATCATAATGCCCCTAAAAATCCTTATTGCTCTTGC
dot-bracket secondary structure
((((((..((((((((..((((((((((((((((((.......)))).)))....))))))))))).))))))))..))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ, Genome Res. 18:995-1004(2008)., "Conservation of small RNA pathways in platypus"
GCAGGGAAAATGAGGGACTTTTGGGGGCAGATGTGTTTCCATTGCACTATCATAATGCCCCTAAAAATCCTTATTGCTCTTGC
dot-bracket secondary structure
((((((..((((((((..((((((((((((((((((.......)))).)))....))))))))))).))))))))..))))))
SIMILARITIES| miRBase gga-mir-365-1: 1e-39 PMRD no hits microPC no hits | UniProt no hits RFAM mir-365: 3e-38 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ, Genome Res. 18:995-1004(2008)., "Conservation of small RNA pathways in platypus"
