ABOUT THIS RECORDspecies: Mus musculus
miRNA family: miR-1186b
source: miRBase, original name: mmu-mir-1186b (MI0014705)
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGGATTAAAGGCATGCACCAC miRNA* GGTGCCTGACTGTGATCCCAAA mismatches: 3 bulges: 0 |
pre-miRNA
TGGGATTAAAGGCATGCACCACTTTTTGTTGTAAGGAGCTGTGGTGCCTGACTGTGATCCCAAA
dot-bracket secondary structure
((((((((.((.((.(((((((..(((.(....).)))..))))))).)).)).))))))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A, Mol Hum Reprod. 16:463-471(2010)., "MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing"
TGGGATTAAAGGCATGCACCACTTTTTGTTGTAAGGAGCTGTGGTGCCTGACTGTGATCCCAAA
dot-bracket secondary structure
((((((((.((.((.(((((((..(((.(....).)))..))))))).)).)).))))))))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A, Mol Hum Reprod. 16:463-471(2010)., "MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing"
