ABOUT THIS RECORDspecies: Mus musculus
source: miRBase, original name: mmu-mir-2139 (MI0010752)
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGCTGCGCTGCTCCTGGTAACTGC miRNA* AGAGGGCCAGGACTGGCATTTGGACATGCAGCTGC mismatches: 4 bulges: 11 |
pre-miRNA
AGAAGGAGCAGAGGGCCAGGACTGGCATTTGGACATGCAGCTGCCCAGCAAGGTGGTGCTGTCCGCAGCTGCGCTGCTCCTGGTAACTGCGGCTT
dot-bracket secondary structure
..(((..((((...(((((((..(((..........((((((((.(((((......)))))...)))))))))))..)))))))..))))..)))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Sdassi N, Silveri L, Laubier J, Tilly G, Costa J, Layani S, Vilotte JL, Le Provost F, BMC Genomics. 10:149(2009)., "Identification and characterization of new miRNAs cloned from normal mouse mammary gland"
AGAAGGAGCAGAGGGCCAGGACTGGCATTTGGACATGCAGCTGCCCAGCAAGGTGGTGCTGTCCGCAGCTGCGCTGCTCCTGGTAACTGCGGCTT
dot-bracket secondary structure
..(((..((((...(((((((..(((..........((((((((.(((((......)))))...)))))))))))..)))))))..))))..)))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Sdassi N, Silveri L, Laubier J, Tilly G, Costa J, Layani S, Vilotte JL, Le Provost F, BMC Genomics. 10:149(2009)., "Identification and characterization of new miRNAs cloned from normal mouse mammary gland"
