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ABOUT THIS RECORD
ID:
MNEST032632
species:
Mus musculus
source:
miRBase, original name:
mmu-mir-5131
(
MI0018043
)
Taxonomy by NCBI:
Mus musculus
Mus
Mus
Murinae
Muridae
Muroidea
Sciurognathi
Rodentia
Glires
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CGGCGCCCCACGGAGCCCCGAGC
miRNA*
CGGATGCGCGTGTGGCGGAAGCGCCGGC
mismatches:
3
bulges:
8
View larger
pre-miRNA
GGCGGCGGCGT
CGGATGCGCGTGTGGCGGAAGCGCCGGC
GGCATGAACTACCCGGGCCG
CGGCGCCCCACGGAGCCCCGAGC
GTAACGGCCGC
dot-bracket secondary structure
.(((((.((((
(((..((.((((.((.....((((((.(
(((.((.......)).))))
))))))))))))..)).)))).)
))....)))))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
Solexa
references
[
1
] Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S,
Blood. [Epub prior to print](2011).
,
"Ordered progression of stage specific miRNA profiles in the mouse B2 B cell lineage"