ABOUT THIS RECORD

ID: MNEST032881
species: Rattus norvegicus
miRNA family: mir-362
source: miRBase, original name: rno-mir-362 (MI0012590)

Taxonomy by NCBI:
Rattus norvegicus Rattus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
CTCGAATCCTTGGAACCTAGGTGTGAATGCTGCTTCAGTGCAACACACCTGTTCAAGGATTCAAA

dot-bracket secondary structure
...(((((((((((...((((((((..(((.((....))))).)))))))))))))))))))...


SIMILARITIES

miRBase mmu-mir-362: 2e-31 PMRD no hits microPC no hits

UniProt no hits RFAM mir-500: 9e-19

Identical with: mmu-mir-362 from miRBase (MNEST032033)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: SOLiD

references
[1] Linsen SE, de Wit E, de Bruijn E, Cuppen E, BMC Genomics. 11:249(2010)., "Small RNA expression and strain specificity in the rat"
[2] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"