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ABOUT THIS RECORD
ID:
MNEST033169
species:
Bos taurus
miRNA family:
mir-30
source:
miRBase, original name:
bta-mir-30e
(
MI0005018
)
Taxonomy by NCBI:
Bos taurus
Bos
Bovinae
Bovidae
Pecora
Ruminantia
Cetartiodactyla
Laurasiatheria
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGTAAACATCCTTGACTGGAAGCT
miRNA*
CTTTCAGTCGGATGTTTACAGC
mismatches:
0
bulges:
2
View larger
pre-miRNA
GGGCAGTCTTTGCTAC
TGTAAACATCCTTGACTGGAAGCT
GTAAGGCGTTGCAAGGAG
CTTTCAGTCGGATGTTTACAGC
GGCAGGCTGCCA
dot-bracket secondary structure
.((((((((..((..(
(((((((((((..(((((((((((
.(...((...))..).))
))))))))))))))))))))).
.)))))))))).
SIMILARITIES
miRBase
mmu-mir-30e
:
4e-40
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-30: 4e-16
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
cloned
references
[
1
] Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP,
Physiol Genomics. 29:35-43(2007).
,
"Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues"