ABOUT THIS RECORDspecies: Bos taurus
miRNA family: mir-34
source: miRBase, original name: bta-mir-34a (MI0005464)
Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGCAGTGTCTTAGCTGGTTGT miRNA* AATCAGCAAGTATACTGCCCTA mismatches: 1 bulges: 2 |
pre-miRNA
GGCCAGCTGTGAGTGTTTCTTTGGCAGTGTCTTAGCTGGTTGTTGTGAGTAATAATGCAGGAAGCAATCAGCAAGTATACTGCCCTAGAAGTGCTGCACG
TTGTGGG
dot-bracket secondary structure
..(((((.(((((..(((((..(((((((((((.((((((((((....(((....)))....))))))))))))).))))))))..)))))..)).))))
))).)..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Gu Z, Eleswarapu S, Jiang H, FEBS Lett. 581:981-988(2007)., "Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland"
GGCCAGCTGTGAGTGTTTCTTTGGCAGTGTCTTAGCTGGTTGTTGTGAGTAATAATGCAGGAAGCAATCAGCAAGTATACTGCCCTAGAAGTGCTGCACG
TTGTGGG
dot-bracket secondary structure
..(((((.(((((..(((((..(((((((((((.((((((((((....(((....)))....))))))))))))).))))))))..)))))..)).))))
))).)..
SIMILARITIES| miRBase lla-mir-34a: 6e-49 PMRD no hits microPC no hits | UniProt no hits RFAM mir-34: 2e-33 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Gu Z, Eleswarapu S, Jiang H, FEBS Lett. 581:981-988(2007)., "Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland"
