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ABOUT THIS RECORD
ID:
MNEST033176
species:
Bos taurus
miRNA family:
mir-34
source:
miRBase, original name:
bta-mir-34b
(
MI0004763
)
Taxonomy by NCBI:
Bos taurus
Bos
Bovinae
Bovidae
Pecora
Ruminantia
Cetartiodactyla
Laurasiatheria
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGGCAGTGTAATTAGCTGATTG
miRNA*
ATCACTAGTTCCACTGCCATC
mismatches:
2
bulges:
1
View larger
pre-miRNA
GTGCTCGGTTTGT
AGGCAGTGTAATTAGCTGATTG
TACTCTCATGCTTACA
ATCACTAGTTCCACTGCCATC
AAAACAAGGCAC
dot-bracket secondary structure
(((((..((((..
.(((((((.((((((.((((((
((..(....)..))))
)))))))))).)))))))...
.))))..)))))
SIMILARITIES
miRBase
cfa-mir-34b
:
1e-30
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-34: 2e-29
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
cloned
references
[
1
] Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP,
Physiol Genomics. 29:35-43(2007).
,
"Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues"