ABOUT THIS RECORDspecies: Bos taurus
miRNA family: mir-99
source: miRBase, original name: bta-mir-99b (MI0005469)
Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CACCCGTAGAACCGACCTTGCG miRNA* CAAGCTCGTGTCTGTGGGTCCG mismatches: 5 bulges: 0 |
pre-miRNA
GGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCACACAAGCTCGTGTCTGTGGGTCCGTGTC
dot-bracket secondary structure
(((((..(((((((((..(((.((((.(((((....))).).).)))).)))..)))))))))..)))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Gu Z, Eleswarapu S, Jiang H, FEBS Lett. 581:981-988(2007)., "Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland"
GGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCACACAAGCTCGTGTCTGTGGGTCCGTGTC
dot-bracket secondary structure
(((((..(((((((((..(((.((((.(((((....))).).).)))).)))..)))))))))..)))))
SIMILARITIES| miRBase eca-mir-99b: 3e-34 PMRD no hits microPC no hits | UniProt no hits RFAM mir-10: 5e-33 |
Identical with: mmu-mir-99b from miRBase (MNEST031826) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Gu Z, Eleswarapu S, Jiang H, FEBS Lett. 581:981-988(2007)., "Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland"
