miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST033351
species: Bos taurus
miRNA family: mir-368
source: miRBase, original name: bta-mir-376d (MI0010445)

Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATCATAGAGGAAAATCCACAT

miRNA*
GTAGATTTTCCTTCTATGATTA

mismatches: 2
bulges: 1

View larger
pre-miRNA
GGTATTTAAAAGGTAGATTTTCCTTCTATGATTACGGGTTTGGTGATTAATCATAGAGGAAAATCCACATTTTCGGTATCAA

dot-bracket secondary structure
(((((..((((.((.(((((((((.(((((((((...(((....))))))))))))))))))))).)).))))..)))))..


SIMILARITIES
miRBase oar-mir-376d: 1e-36

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-154: 3e-22

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references

[1] Artzi S, Kiezun A, Shomron N, BMC Bioinformatics. 9:39(2008)., "miRNAminer: a tool for homologous microRNA gene search"




Liczniki na strone;