ABOUT THIS RECORDspecies: Bos taurus
miRNA family: mir-431
source: miRBase, original name: bta-mir-431 (MI0009830)
Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGTCTTGCAGGCCGTCATGCAGG miRNA* TGCGCGTCCTGCGAGGTGTC mismatches: 4 bulges: 3 |
pre-miRNA
TCCTGCGCGTCCTGCGAGGTGTCTTGCAGGCCGTCATGCAGGCCACACTGACGGAAACGTTGCAGGTCGTCTTGCAGGGCTTCTCGCAAGACGACATATT
CATCACCCTCGACG
dot-bracket secondary structure
.((((((((.((((((((....)))))))).)))...))))).......((((....))))....((((((((((..(....)..)))))))))).....
..............
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Strozzi F, Mazza R, Malinverni R, Williams JL, Anim Genet. 40:125(2009)., "Annotation of 390 bovine miRNA genes by sequence similarity with other species"
TCCTGCGCGTCCTGCGAGGTGTCTTGCAGGCCGTCATGCAGGCCACACTGACGGAAACGTTGCAGGTCGTCTTGCAGGGCTTCTCGCAAGACGACATATT
CATCACCCTCGACG
dot-bracket secondary structure
.((((((((.((((((((....)))))))).)))...))))).......((((....))))....((((((((((..(....)..)))))))))).....
..............
SIMILARITIES| miRBase rno-mir-431: 2e-49 PMRD no hits microPC no hits | UniProt sp|Q52QI2|RTL1_BOVIN: 0.000000000000009 RFAM mir-431: 6e-40 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Strozzi F, Mazza R, Malinverni R, Williams JL, Anim Genet. 40:125(2009)., "Annotation of 390 bovine miRNA genes by sequence similarity with other species"
