ABOUT THIS RECORDspecies: Bos taurus
miRNA family: mir-450
source: miRBase, original name: bta-mir-450-1 (MI0012213)
Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTTGCGATGTGTTCCTAATAT miRNA* ATTGGGAGCATTTTGCATGCAT mismatches: 4 bulges: 0 |
pre-miRNA
ACTATTTTTGCGATGTGTTCCTAATATGCAGTATAAATATATTGGGAGCATTTTGCATGCATGGTTTTGTATCAATATACAG
dot-bracket secondary structure
(((((...(((((.((((((((((((((.........)))))))))))))).)))))...)))))..(((((....))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Jin W, Grant JR, Stothard P, Moore SS, Guan LL, BMC Mol Biol. 10:90(2009)., "Characterization of bovine miRNAs by sequencing and bioinformatics analysis"
ACTATTTTTGCGATGTGTTCCTAATATGCAGTATAAATATATTGGGAGCATTTTGCATGCATGGTTTTGTATCAATATACAG
dot-bracket secondary structure
(((((...(((((.((((((((((((((.........)))))))))))))).)))))...)))))..(((((....))))).
SIMILARITIES| miRBase eca-mir-450a: 4e-37 PMRD no hits microPC no hits | UniProt no hits RFAM mir-450: 4e-31 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Jin W, Grant JR, Stothard P, Moore SS, Guan LL, BMC Mol Biol. 10:90(2009)., "Characterization of bovine miRNAs by sequencing and bioinformatics analysis"
