ABOUT THIS RECORDspecies: Bos taurus
miRNA family: mir-154
source: miRBase, original name: bta-mir-453 (MI0009839)
Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGGTTGTCCGTGGTGAGTTCGCA miRNA* CGGGAACGCCACCAGCAGCACTGC mismatches: 5 bulges: 1 |
pre-miRNA
GCGGGAACGCCACCAGCAGCACTGCCTCACGGTACTTGGAGGGAGGTTGTCCGTGGTGAGTTCGCATTATTTAATGATGC
dot-bracket secondary structure
(((((..((((((..(((((.((.((((.((.....)))))).)))))))..))))))..)))))...............
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Strozzi F, Mazza R, Malinverni R, Williams JL, Anim Genet. 40:125(2009)., "Annotation of 390 bovine miRNA genes by sequence similarity with other species"
GCGGGAACGCCACCAGCAGCACTGCCTCACGGTACTTGGAGGGAGGTTGTCCGTGGTGAGTTCGCATTATTTAATGATGC
dot-bracket secondary structure
(((((..((((((..(((((.((.((((.((.....)))))).)))))))..))))))..)))))...............
SIMILARITIES| miRBase mml-mir-453: 4e-21 PMRD no hits microPC no hits | UniProt no hits RFAM mir-154: 1e-18 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Strozzi F, Mazza R, Malinverni R, Williams JL, Anim Genet. 40:125(2009)., "Annotation of 390 bovine miRNA genes by sequence similarity with other species"
