ABOUT THIS RECORDspecies: Bos taurus
miRNA family: mir-1282
source: miRBase, original name: bta-mir-1282 (MI0010455)
Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGTTTGCCTTTTTCTGCTT miRNA* GTACCAGAGGGCAAAAAGGA mismatches: 4 bulges: 0 |
pre-miRNA
CCTTCTTCTCGTTTGCCTTTTTCTGCTTCTGCTGCATGATCTCCGAGTCCCTAGGGGTAGAGATGATGGGGCACTGGGAGGTACCAGAGGGCAAAAAGGA
C
dot-bracket secondary structure
......(((..((((((((((..((((((((((.(((.(((((....(((....)))..))))).))).)))....)))))))..))))))))))..)))
.
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Strozzi F, Mazza R, Malinverni R, Williams JL, Anim Genet. 40:125(2009)., "Annotation of 390 bovine miRNA genes by sequence similarity with other species"
CCTTCTTCTCGTTTGCCTTTTTCTGCTTCTGCTGCATGATCTCCGAGTCCCTAGGGGTAGAGATGATGGGGCACTGGGAGGTACCAGAGGGCAAAAAGGA
C
dot-bracket secondary structure
......(((..((((((((((..((((((((((.(((.(((((....(((....)))..))))).))).)))....)))))))..))))))))))..)))
.
SIMILARITIES| miRBase ppy-mir-1282: 1e-52 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: ppy-mir-1282 from miRBase (MNEST031337) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Strozzi F, Mazza R, Malinverni R, Williams JL, Anim Genet. 40:125(2009)., "Annotation of 390 bovine miRNA genes by sequence similarity with other species"
